CLC RNA Workbench  v.4 5

The CLC RNA Workbench gives the user easy access to a range of complex algorithms and options. RNA secondary structures can be predicted using state-of-the-art free energy minimization algorithms.

VARNA (Visualization Applet for RNA)  v.3.8

VARNA (Visualization Applet for RNA) is a Java lightweight component and applet for drawing the RNA secondary structure. Create RNA structures with this tool.


CLC Main Workbench  v.6 2

CLC Main Workbench aggregates user friendly gene expression analysis with all features of CLC Protein Workbench, CLC RNA Workbench, and CLC DNA Workbench in one integrated software package.

CLC Sequence Viewer  v.6. 5. 2003

CLC Sequence Viewer creates a software environment enabling users to make a large number of bioinformatics analyses, combined with smooth data management, and excellent graphical viewing and output options.

ArrayExpress R Workbench  v.1. 1. 2001

ArrayExpress is an R based pipeline for pre-processing, expression estimation and data quality assessment of high throughput sequencing transcriptional profiling (RNA-seq) data sets.

CrossLink  v.2 1

CrossLink is a versatile tool for the exploration of relationships between RNA sequences. After a parametrization phase, CrossLink uses the established tools BLAST, Vmatch and RNAhybrid to determine sequence relationships.

GeneView  v.

GeneView is a software tool that allows the visualization of genetic sequence data. The data to be visualized are taken from the GenBank of NIH (National Institute of Health), an annotated collection of publicly accessible DNA and RNA sequences.


MiraiBio DNASIS MAX is a bioinformatics software for DNA/RNA/Amino Acid sequence analysis. DNASIS MAX bioinformatics software helps life scientists edit, annotate and analyze DNA, RNA and amino acid sequences.

Avadis NGS  v.1.0

Avadis NGS is a desktop software platform for analysis, visualization, and management of data generated by next-generation sequencing (NGS) platforms.

MiRPI  v.1.0

MicroRNAs (miRNAs) are newly discovered class of non-coding small RNAs of 20-24 nucleotide length that regulate gene and protein expression in plants and animals. MiRNAs have so far been identified mostly by specific cloning of small RNA molecules,

4SALE  v.1.5

4SALE is a software for Synchronous RNA Sequence and Secondary Structure Alignment and Editing. 4SALE now integrates lara as a sequence and secondary structure aligment alternative to the 4SALE alignment option. In sequence analysis the multiple

XRNA  v.1.1.12

Create RNA secondary structure diagrams fast and easy. XRNA is a Java based suite of tools for the creation, annotation and display of RNA secondary structure diagrams.

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